|
週次 |
日期 |
單元主題 |
|
第1週 |
02/23 |
Class setup.
Introductory information.
Central dogma in molecular biology.
Survey on mathematical backgrounds. |
|
第2週 |
03/01 |
Michaelis-Menten kinetics
Appendices A and B (Alon)
Basic functions, differential and integration.
Taylor expansion. |
|
第3週 |
03/08 |
Ordinary differential equations(O'Neil)
Linear Algebra(O'Neil) |
|
第4週 |
03/15 |
Linear Algebra(O'Neil)
Solving Linear ODEs with eigen values and eigen vectors. (Strogatz chapter 5) |
|
第5週 |
03/22 |
Bifurcation analysis I (Chapters 2-3 Strogatz)
|
|
第6週 |
03/29 |
Bifurcation analysis II (Chapters 3-4 Strogatz)
|
|
第7週 |
04/05 |
Recess |
|
第8週 |
04/12 |
Review for Midterm |
|
第9週 |
04/19 |
Midterm |
|
第10週 |
04/26 |
Two-dimensional flows (Chapter 6 Strogatz) |
|
第11週 |
05/03 |
Limit Cycles (Chapter 7, Strogatz) |
|
第12週 |
05/10 |
Other modeling techniques: Boolean networks |
|
第13週 |
05/17 |
Other modeling techniques: Stochastic simulations |
|
第14週 |
05/24 |
Network motifs (Alon) Feedforward loops I |
|
第15週 |
05/31 |
Feedforward loops II (Alon)
Literature reviews |
|
第16週 |
06/07 |
Literature reviews or term project reports |
|
第17週 |
06/14 |
Literature reviews or term project reports |
|
第18週 |
06/21 |
Final exam |